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NMRlipids-2025 Workshop: Open-science FAIR Database for Disordered Proteins and Lipids

The NMRlipids 2025 Hackathon and Workshop is organized as a part of the OSCARS FAIRMD project focused on Streamlining Biomolecule Simulation Re-Use with the FAIR NMRlipids Databank. The latter is an established collaborative open-science databank maintained by the NMRlipids project. Currently, NMRlipids Databank hosts both simulation and experimental data on lipid bilayers with the extensive possibility of quality evaluation of simulations and giving both API and GUI access to the hosted data. In FAIRMD project, the databank will be extended also to intrinsically disordered proteins (IDPs).  

The focus on the workshop will be to further develop NMRlipids Databank for lipids and progress its expansion to FAIRMD Databank containing also IDPs. Most time will be devoted to working together to progress toward goals, yet a few talks and discussion sessions will be also organized.  

 

The detailed program can be found on GoogleDocs. 

 

There is no registration fee, but the number of participants is limited to 20. If you are interested in participating, but do not have funding, please contact the organizers. 

The main goals of the event are: 

  • Improve the codebase and FAIRness of NMRlipids Databank  

  • Extend NMRlipids Databank to FAIRMD Databank containing also IDPs 

  • Promote machine learning and other applications of NMRlipids Databank 

  • Familiarize participants to procedures of contributing, using and building the NMRlipids Databank and other overlay databanks 

  • Discuss on future extensions of NMRlipids and FAIRMD Databanks to new systems (e.g. lipid monolayers) 

  • Discuss on quality evaluation metrics for IDP simulations 

 

The event is targeted for people who: 

  • Are interested to work on the above listed goals 

  • Are interested in using or developing NMRlipids Databank for lipids or IDPs 

  • Are excited about open-source scientific projects, 

  • Are interested in structural studies of IDPs or lipid bi/monolayers (both simulation or experimental!), 

If you are just interested in the field but not sure what you would like to do, please feel free to contact the organizers! 

Please sing up below. Kindly contact the organizers if you would like to join for only part of the event. The first 2 days of this event are organized as part of the DLN RDM tool hackathon.

 

 

 

 

Emneord: FAIR, data deposition, IDP, lipids, proteins, MD, hackathon
Publisert 30. apr. 2025 18:08 - Sist endret 9. mai 2025 16:22